Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 MIR648-201ENST00000385046 94 ntBASIC16.74■□□□□ 0.27
SRRM3A6NNA2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 AP005018.1-201ENST00000525475 301 ntBASIC16.74■□□□□ 0.27
SRRM3A6NNA2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SRRM3A6NNA2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 MIR661-201ENST00000384842 89 ntBASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AP002414.1-201ENST00000391405 1147 ntBASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AC023141.5-201ENST00000458585 616 ntBASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AC067863.1-201ENST00000494933 530 ntBASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 AC105339.1-204ENST00000636249 355 ntBASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM3A6NNA2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 BASP1P1-201ENST00000430708 665 ntBASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 AC122714.2-201ENST00000502787 707 ntBASIC16.72■□□□□ 0.27
SRRM3A6NNA2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.72■□□□□ 0.27
SRRM3A6NNA2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms