Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 ATP5G2P1-201ENST00000433580 426 ntBASIC17.25■□□□□ 0.35
CTAGE9A4FU28 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.25■□□□□ 0.35
CTAGE9A4FU28 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 C18orf15-201ENST00000623680 2534 ntBASIC17.24■□□□□ 0.35
CTAGE9A4FU28 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 AC004706.3-202ENST00000621574 984 ntBASIC17.24■□□□□ 0.35
CTAGE9A4FU28 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTAGE9A4FU28 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
CTAGE9A4FU28 AC092127.1-201ENST00000567093 3455 ntBASIC17.23■□□□□ 0.35
CTAGE9A4FU28 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTAGE9A4FU28 AC026396.1-201ENST00000419388 421 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms