Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AP3S2-216ENST00000617003 1561 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 HAUS4P1-201ENST00000406739 1145 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AC069120.2-201ENST00000524091 540 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 RARRES2P9-201ENST00000565168 469 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 MIR4745-201ENST00000577608 62 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AL365330.1-201ENST00000607459 531 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PRAL-201ENST00000624952 3286 ntBASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPDC1A2A3K4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AC003101.2-201ENST00000612557 442 ntBASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AC018529.1-201ENST00000613063 361 ntBASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 AJ011932.1-201ENST00000621707 465 ntBASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPDC1A2A3K4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 AC245100.5-201ENST00000452108 331 ntBASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 MIR4321-201ENST00000592276 80 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms