Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 KRT8P39-201ENST00000396270 1433 ntBASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA9Q9Y5G4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA9Q9Y5G4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AC104794.3-201ENST00000566840 1248 ntBASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA9Q9Y5G4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 AL512384.1-201ENST00000406683 331 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 RN7SL752P-201ENST00000463779 287 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DOC2GP-202ENST00000514950 1163 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 AC010336.2-201ENST00000564226 506 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 AC026979.3-201ENST00000607315 403 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 AL162274.1-201ENST00000617191 1098 ntBASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA9Q9Y5G4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms