Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 AC007950.2-201ENST00000615045 2347 ntBASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHA4Q9UN74 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHA4Q9UN74 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 MIR943-201ENST00000401286 94 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 FO393414.2-201ENST00000405153 598 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 AZGP1P1-201ENST00000411909 902 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 AC092580.3-201ENST00000430932 139 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 AC097493.3-201ENST00000509725 367 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 RFPL4AP1-201ENST00000530883 850 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 TEX28P1-201ENST00000613479 1221 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 TEX28P2-201ENST00000617764 1221 ntBASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA4Q9UN74 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 PHKG1P2-201ENST00000457537 863 ntBASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 AL450472.2-201ENST00000603663 1156 ntBASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 AC093512.1-201ENST00000617969 520 ntBASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA4Q9UN74 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms