Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL139384.1-201ENST00000612143 3047 ntBASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 AC051619.7-201ENST00000568314 623 ntBASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 AC015911.4-201ENST00000588022 1070 ntBASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 AL450472.2-201ENST00000603663 1156 ntBASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 AC092850.2-201ENST00000623821 2697 ntBASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BLOC1S4Q9NUP1 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 KRT8P12-202ENST00000472924 1397 ntBASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 AL080243.2-201ENST00000418783 582 ntBASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BLOC1S4Q9NUP1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 TUBB3P1-201ENST00000405796 1332 ntBASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 RPL37AP1-201ENST00000412502 279 ntBASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.81■□□□□ 0.44
BLOC1S4Q9NUP1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms