Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AP3S2-216ENST00000617003 1561 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 FAM220BP-201ENST00000377689 816 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 HLA-H-201ENST00000383620 1096 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AC109322.1-201ENST00000524499 1264 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AC004449.1-201ENST00000564240 433 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 AC026150.2-201ENST00000564693 1156 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AP001059.3-201ENST00000619053 235 ntBASIC13.81□□□□□ -0.2
GCM1Q9NP62 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GCM1Q9NP62 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.81□□□□□ -0.2
GCM1Q9NP62 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SBF1P1-201ENST00000444527 5631 ntBASIC13.8□□□□□ -0.2
GCM1Q9NP62 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 AC025678.2-201ENST00000562061 970 ntBASIC13.8□□□□□ -0.2
GCM1Q9NP62 RARRES2P9-201ENST00000565168 469 ntBASIC13.8□□□□□ -0.2
GCM1Q9NP62 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 PCDH8P1-201ENST00000428983 2773 ntBASIC13.8□□□□□ -0.2
GCM1Q9NP62 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 PCDHB19P-201ENST00000570871 2371 ntBASIC13.8□□□□□ -0.2
GCM1Q9NP62 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GCM1Q9NP62 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GCM1Q9NP62 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms