Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 HCG4-201ENST00000418983 998 ntBASIC17.01■□□□□ 0.31
CD248Q9HCU0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 SPDYE14P-201ENST00000442619 822 ntBASIC17.01■□□□□ 0.31
CD248Q9HCU0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 KRT8P23-201ENST00000560090 1207 ntBASIC17.01■□□□□ 0.31
CD248Q9HCU0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 AC073347.1-201ENST00000421633 2643 ntBASIC17.01■□□□□ 0.31
CD248Q9HCU0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.01■□□□□ 0.31
CD248Q9HCU0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD248Q9HCU0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD248Q9HCU0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 RNU1-129P-201ENST00000384064 167 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 CNN2P2-201ENST00000443536 909 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 CNN2P3-201ENST00000450201 906 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17■□□□□ 0.31
CD248Q9HCU0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17■□□□□ 0.31
CD248Q9HCU0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 MIR3909-201ENST00000579518 119 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 AC091167.2-201ENST00000579581 588 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 U1.21-201ENST00000580816 167 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 AL136317.3-201ENST00000618497 906 ntBASIC17■□□□□ 0.31
CD248Q9HCU0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17■□□□□ 0.31
CD248Q9HCU0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17■□□□□ 0.31
CD248Q9HCU0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17■□□□□ 0.31
CD248Q9HCU0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CD248Q9HCU0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD248Q9HCU0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17■□□□□ 0.31
CD248Q9HCU0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 C8orf49-201ENST00000525043 1968 ntBASIC16.99■□□□□ 0.31
CD248Q9HCU0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD248Q9HCU0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.99■□□□□ 0.31
CD248Q9HCU0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms