Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBQLN3Q9H347 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBQLN3Q9H347 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 ALG1L8P-201ENST00000533887 760 ntBASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AC069262.1-201ENST00000539058 672 ntBASIC14.95□□□□□ -0.02
UBQLN3Q9H347 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 AL355385.1-201ENST00000606123 409 ntBASIC14.95□□□□□ -0.02
UBQLN3Q9H347 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 Z92544.3-201ENST00000624747 417 ntBASIC14.95□□□□□ -0.02
UBQLN3Q9H347 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.95□□□□□ -0.02
UBQLN3Q9H347 CDC14C-201ENST00000428251 1719 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms