Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AC138969.2-201ENST00000532739 9932 ntBASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AC073648.2-201ENST00000510116 352 ntBASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 IGHV3-65-201ENST00000523210 341 ntBASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 AL031055.1-201ENST00000606362 631 ntBASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 AKR1C7P-201ENST00000305623 895 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 RNU1-129P-201ENST00000384064 167 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 AC073621.1-201ENST00000392730 636 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 PMS2P4-201ENST00000412466 1052 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 MIR3909-201ENST00000579518 119 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 U1.21-201ENST00000580816 167 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SSR4P1-203ENST00000599569 2260 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 AC020658.6-201ENST00000623564 1870 ntBASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD4Q9H0A8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
COMMD4Q9H0A8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms