Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 AL450472.2-201ENST00000603663 1156 ntBASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCSER1Q9C0I3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCSER1Q9C0I3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 AC020658.6-201ENST00000623564 1870 ntBASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 AC003101.2-201ENST00000612557 442 ntBASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.95■□□□□ 0.46
CCSER1Q9C0I3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 AL035456.1-201ENST00000456064 1369 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 AP003680.1-201ENST00000598970 3660 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 HLA-J-203ENST00000494367 1087 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 SNHG9-202ENST00000564014 471 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 AC097359.3-201ENST00000603982 1210 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 RN7SL828P-201ENST00000607615 303 ntBASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCSER1Q9C0I3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCSER1Q9C0I3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms