Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 AC254562.1-201ENST00000417586 456 ntBASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 MIR4515-201ENST00000584082 81 ntBASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 ELL2P1-201ENST00000413990 1906 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 PMS2P4-201ENST00000412466 1052 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 KRT19P2-202ENST00000557173 1012 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 PDPK2P-202ENST00000562415 1191 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 OR7E47P-204ENST00000575924 449 ntBASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXP3Q9BZS1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 RNU1-129P-201ENST00000384064 167 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AC096734.2-201ENST00000562054 433 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 U1.21-201ENST00000580816 167 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 LINC02084-201ENST00000606069 1096 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AL365330.1-201ENST00000607459 531 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AC006486.2-201ENST00000624246 2199 ntBASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FOXP3Q9BZS1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms