Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.23■□□□□ 0.19
NDNQ99608 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.23■□□□□ 0.19
NDNQ99608 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.23■□□□□ 0.19
NDNQ99608 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NDNQ99608 AC092865.6-201ENST00000642101 219 ntBASIC16.23■□□□□ 0.19
NDNQ99608 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.23■□□□□ 0.19
NDNQ99608 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 AC073439.1-201ENST00000624121 1774 ntBASIC16.23■□□□□ 0.19
NDNQ99608 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.23■□□□□ 0.19
NDNQ99608 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
NDNQ99608 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDNQ99608 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NDNQ99608 MIR648-201ENST00000385046 94 ntBASIC16.22■□□□□ 0.19
NDNQ99608 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
NDNQ99608 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NDNQ99608 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.22■□□□□ 0.19
NDNQ99608 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 PDPK2P-202ENST00000562415 1191 ntBASIC16.22■□□□□ 0.19
NDNQ99608 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.22■□□□□ 0.19
NDNQ99608 AC140113.2-201ENST00000604370 208 ntBASIC16.22■□□□□ 0.19
NDNQ99608 AC068137.2-201ENST00000605408 478 ntBASIC16.22■□□□□ 0.19
NDNQ99608 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDNQ99608 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDNQ99608 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NDNQ99608 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.22■□□□□ 0.19
NDNQ99608 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.21■□□□□ 0.19
NDNQ99608 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NDNQ99608 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.21■□□□□ 0.19
NDNQ99608 MED15P5-201ENST00000423150 992 ntBASIC16.21■□□□□ 0.19
NDNQ99608 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.21■□□□□ 0.19
NDNQ99608 AC074386.1-202ENST00000463561 864 ntBASIC16.21■□□□□ 0.19
NDNQ99608 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
NDNQ99608 BX640515.1-201ENST00000617215 977 ntBASIC16.21■□□□□ 0.19
NDNQ99608 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.21■□□□□ 0.19
NDNQ99608 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.21■□□□□ 0.19
NDNQ99608 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
NDNQ99608 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms