Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AC004987.2-201ENST00000395959 1148 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 TMEM14DP-201ENST00000422205 345 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 RN7SL837P-201ENST00000463010 287 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AC092337.1-201ENST00000568699 1129 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 PCDHA14-201ENST00000506751 2298 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 CROCCP1-201ENST00000426910 5675 ntBASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85AQ96PX6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 AC074338.1-201ENST00000416825 156 ntBASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 ARSEP1-201ENST00000420443 635 ntBASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 AC243562.2-201ENST00000561247 970 ntBASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 CLK3P2-201ENST00000427566 1453 ntBASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC85AQ96PX6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
CCDC85AQ96PX6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
CCDC85AQ96PX6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC85AQ96PX6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC85AQ96PX6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 WFDC1-204ENST00000613603 549 ntBASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC85AQ96PX6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 ATP5G2P4-201ENST00000442175 420 ntBASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 IGHV3-71-201ENST00000523324 359 ntBASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC85AQ96PX6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms