Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TTC9Q92623 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 HLA-H-201ENST00000383620 1096 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TTC9Q92623 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 AL353705.2-201ENST00000428243 662 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC9Q92623 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TTC9Q92623 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC9Q92623 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 AC021097.1-201ENST00000607902 574 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 AC004790.1-201ENST00000612686 536 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
TTC9Q92623 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 AC007431.3-201ENST00000623221 587 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC9Q92623 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9Q92623 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TTC9Q92623 AC105917.1-201ENST00000506637 2539 ntBASIC15.36■□□□□ 0.05
TTC9Q92623 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9Q92623 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TTC9Q92623 SPDYE19P-201ENST00000338590 713 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 MTND6P24-201ENST00000440466 518 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 KRT223P-202ENST00000449164 1292 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 DOC2GP-202ENST00000514950 1163 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC9Q92623 RN7SL828P-201ENST00000607615 303 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TTC9Q92623 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9Q92623 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9Q92623 AGGF1P2-201ENST00000426656 2106 ntBASIC15.35■□□□□ 0.05
TTC9Q92623 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9Q92623 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms