Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC069224.1-201ENST00000566372 1715 ntBASIC15.79■□□□□ 0.12
ATL1Q8WXF7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 LINC02447-202ENST00000501888 2146 ntBASIC15.79■□□□□ 0.12
ATL1Q8WXF7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 AL365203.3-201ENST00000609742 2057 ntBASIC15.79■□□□□ 0.12
ATL1Q8WXF7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATL1Q8WXF7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AC007950.2-201ENST00000615045 2347 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 FAM220BP-201ENST00000377689 816 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AL592309.1-201ENST00000443127 649 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 YBX1P5-201ENST00000509441 847 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 LINC01225-203ENST00000563550 1244 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 AP001282.1-201ENST00000531301 1499 ntBASIC15.78■□□□□ 0.12
ATL1Q8WXF7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
ATL1Q8WXF7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 HLA-H-201ENST00000383620 1096 ntBASIC15.77■□□□□ 0.12
ATL1Q8WXF7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.77■□□□□ 0.12
ATL1Q8WXF7 AC055717.3-201ENST00000622967 595 ntBASIC15.77■□□□□ 0.12
ATL1Q8WXF7 AC084121.4-201ENST00000641598 221 ntBASIC15.77■□□□□ 0.12
ATL1Q8WXF7 AF228730.8-201ENST00000642140 221 ntBASIC15.77■□□□□ 0.12
ATL1Q8WXF7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 UXT-AS1-201ENST00000590504 1525 ntBASIC15.77■□□□□ 0.11
ATL1Q8WXF7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATL1Q8WXF7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms