Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 ALOX12P2-203ENST00000570921 1945 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AL627223.1-201ENST00000416693 442 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 TSEN15P1-201ENST00000423257 515 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AL138918.1-201ENST00000568306 659 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 AC073439.1-201ENST00000624121 1774 ntBASIC16.61■□□□□ 0.25
PAF1Q8N7H5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 MIR193BHG-211ENST00000641433 5365 ntBASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 AC067750.1-201ENST00000608826 6545 ntBASIC16.6■□□□□ 0.25
PAF1Q8N7H5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 METTL21AP1-201ENST00000438852 635 ntBASIC16.6■□□□□ 0.25
PAF1Q8N7H5 AC069335.1-201ENST00000489972 472 ntBASIC16.6■□□□□ 0.25
PAF1Q8N7H5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 AL662844.4-201ENST00000606367 2838 ntBASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.6■□□□□ 0.25
PAF1Q8N7H5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 AC005622.1-201ENST00000636801 1703 ntBASIC16.59■□□□□ 0.25
PAF1Q8N7H5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 RBPMS2P1-201ENST00000437762 623 ntBASIC16.59■□□□□ 0.25
PAF1Q8N7H5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 SLC25A39P2-201ENST00000537614 270 ntBASIC16.59■□□□□ 0.25
PAF1Q8N7H5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms