Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01561Q8N1V8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 OR7E47P-204ENST00000575924 449 ntBASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01561Q8N1V8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01561Q8N1V8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms