Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 UGT1A2P-201ENST00000454886 866 ntBASIC16.94■□□□□ 0.3
RNF43Q68DV7 AC125807.1-201ENST00000483097 614 ntBASIC16.94■□□□□ 0.3
RNF43Q68DV7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 IGHV3-42-201ENST00000520410 361 ntBASIC16.94■□□□□ 0.3
RNF43Q68DV7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 AL136379.1-201ENST00000623471 2642 ntBASIC16.94■□□□□ 0.3
RNF43Q68DV7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AL031731.1-201ENST00000642131 2094 ntBASIC16.93■□□□□ 0.3
RNF43Q68DV7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AC027307.3-201ENST00000594262 1100 ntBASIC16.93■□□□□ 0.3
RNF43Q68DV7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AL359881.2-201ENST00000602973 570 ntBASIC16.93■□□□□ 0.3
RNF43Q68DV7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF43Q68DV7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 AC144831.1-201ENST00000573312 2656 ntBASIC16.93■□□□□ 0.3
RNF43Q68DV7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF43Q68DV7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 OR8S1-201ENST00000310194 1080 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 FAM220BP-201ENST00000377689 816 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 HLA-V-201ENST00000429037 534 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 AL512638.1-201ENST00000457493 794 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms