Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDC42P60953 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
CDC42P60953 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDC42P60953 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42P60953 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42P60953 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42P60953 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42P60953 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDC42P60953 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDC42P60953 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC42P60953 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42P60953 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42P60953 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CDC42P60953 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 AC067750.1-201ENST00000608826 6545 ntBASIC14.78□□□□□ -0.04
CDC42P60953 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 AC011477.6-201ENST00000604980 1927 ntBASIC14.78□□□□□ -0.04
CDC42P60953 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.78□□□□□ -0.04
CDC42P60953 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42P60953 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42P60953 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC42P60953 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42P60953 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms