Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SEC13P55735 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC13P55735 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC13P55735 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC13P55735 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC13P55735 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC13P55735 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.21■□□□□ 0.18
SEC13P55735 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SEC13P55735 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.21■□□□□ 0.18
SEC13P55735 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SEC13P55735 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.2■□□□□ 0.18
SEC13P55735 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.2■□□□□ 0.18
SEC13P55735 KRT223P-202ENST00000449164 1292 ntBASIC16.2■□□□□ 0.18
SEC13P55735 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.2■□□□□ 0.18
SEC13P55735 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.2■□□□□ 0.18
SEC13P55735 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.2■□□□□ 0.18
SEC13P55735 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.2■□□□□ 0.18
SEC13P55735 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SEC13P55735 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SEC13P55735 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 BNIP3P1-202ENST00000550043 1585 ntBASIC16.2■□□□□ 0.18
SEC13P55735 REXO1L8P-201ENST00000604378 1897 ntBASIC16.2■□□□□ 0.18
SEC13P55735 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC13P55735 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 ALOX12P2-203ENST00000570921 1945 ntBASIC16.19■□□□□ 0.18
SEC13P55735 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SEC13P55735 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SEC13P55735 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.19■□□□□ 0.18
SEC13P55735 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SEC13P55735 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.19■□□□□ 0.18
SEC13P55735 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.19■□□□□ 0.18
SEC13P55735 AC119751.2-201ENST00000504529 210 ntBASIC16.19■□□□□ 0.18
SEC13P55735 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.19■□□□□ 0.18
SEC13P55735 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.19■□□□□ 0.18
SEC13P55735 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.19■□□□□ 0.18
SEC13P55735 AC015936.2-201ENST00000593177 259 ntBASIC16.19■□□□□ 0.18
SEC13P55735 COX11-210ENST00000639671 696 ntBASIC16.19■□□□□ 0.18
SEC13P55735 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SEC13P55735 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC13P55735 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms