Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
SRP9P49458 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
SRP9P49458 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 AC023908.3-201ENST00000564211 3047 ntBASIC14.37□□□□□ -0.11
SRP9P49458 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 GGT3P-204ENST00000453783 1664 ntBASIC14.37□□□□□ -0.11
SRP9P49458 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.37□□□□□ -0.11
SRP9P49458 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SRP9P49458 MED15P5-201ENST00000423150 992 ntBASIC14.37□□□□□ -0.11
SRP9P49458 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.37□□□□□ -0.11
SRP9P49458 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 CXCL1P1-201ENST00000502804 216 ntBASIC14.37□□□□□ -0.11
SRP9P49458 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 AC091167.2-201ENST00000579581 588 ntBASIC14.37□□□□□ -0.11
SRP9P49458 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.37□□□□□ -0.11
SRP9P49458 FAM197Y3-203ENST00000618346 717 ntBASIC14.37□□□□□ -0.11
SRP9P49458 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.37□□□□□ -0.11
SRP9P49458 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.37□□□□□ -0.11
SRP9P49458 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.37□□□□□ -0.11
SRP9P49458 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.37□□□□□ -0.11
SRP9P49458 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.37□□□□□ -0.11
SRP9P49458 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRP9P49458 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRP9P49458 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRP9P49458 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRP9P49458 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.36□□□□□ -0.11
SRP9P49458 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.36□□□□□ -0.11
SRP9P49458 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRP9P49458 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.36□□□□□ -0.11
SRP9P49458 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.36□□□□□ -0.11
SRP9P49458 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 KRT18P58-201ENST00000527480 1120 ntBASIC14.36□□□□□ -0.11
SRP9P49458 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 DUX4L17-201ENST00000557360 1267 ntBASIC14.36□□□□□ -0.11
SRP9P49458 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms