Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN1P35523 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CLCN1P35523 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN1P35523 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN1P35523 BX005266.1-201ENST00000473402 457 ntBASIC18.4■□□□□ 0.54
CLCN1P35523 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN1P35523 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN1P35523 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN1P35523 NKAPP1-205ENST00000585790 367 ntBASIC18.4■□□□□ 0.54
CLCN1P35523 AL121772.3-201ENST00000610840 674 ntBASIC18.4■□□□□ 0.54
CLCN1P35523 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN1P35523 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN1P35523 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN1P35523 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN1P35523 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN1P35523 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC18.39■□□□□ 0.54
CLCN1P35523 GPR89P-201ENST00000407924 1495 ntBASIC18.39■□□□□ 0.54
CLCN1P35523 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.39■□□□□ 0.54
CLCN1P35523 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLCN1P35523 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLCN1P35523 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLCN1P35523 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 LINC00982-205ENST00000420957 435 ntBASIC18.39■□□□□ 0.53
CLCN1P35523 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.39■□□□□ 0.53
CLCN1P35523 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.39■□□□□ 0.53
CLCN1P35523 MTDHP3-201ENST00000594186 672 ntBASIC18.39■□□□□ 0.53
CLCN1P35523 AC012313.10-201ENST00000623509 926 ntBASIC18.39■□□□□ 0.53
CLCN1P35523 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLCN1P35523 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CLCN1P35523 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLCN1P35523 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLCN1P35523 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN1P35523 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 COL6A4P2-202ENST00000504443 2753 ntBASIC18.38■□□□□ 0.53
CLCN1P35523 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLCN1P35523 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 APP-205ENST00000358918 2366 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 RBM17P3-201ENST00000417687 1192 ntBASIC18.38■□□□□ 0.53
CLCN1P35523 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms