Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN3P26045 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTPN3P26045 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN3P26045 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 AL136982.4-201ENST00000437689 1740 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PTPN3P26045 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 KRT18P32-201ENST00000424695 1287 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 RPS8P6-201ENST00000426177 609 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.42■□□□□ 0.22
PTPN3P26045 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 AP000344.2-201ENST00000512987 629 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN3P26045 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PTPN3P26045 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 AC243562.2-201ENST00000561247 970 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 BNIP3P1-202ENST00000550043 1585 ntBASIC16.42■□□□□ 0.22
PTPN3P26045 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN3P26045 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN3P26045 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN3P26045 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTPN3P26045 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTPN3P26045 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN3P26045 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PTPN3P26045 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN3P26045 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PTPN3P26045 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 AC211486.1-202ENST00000416371 468 ntBASIC16.41■□□□□ 0.22
PTPN3P26045 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 AC211476.1-201ENST00000503899 468 ntBASIC16.41■□□□□ 0.22
PTPN3P26045 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PTPN3P26045 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.41■□□□□ 0.22
PTPN3P26045 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.41■□□□□ 0.22
PTPN3P26045 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
PTPN3P26045 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN3P26045 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN3P26045 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms