Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.57■□□□□ 0.08
CAPN3P20807 AC136632.2-201ENST00000512891 861 ntBASIC15.57■□□□□ 0.08
CAPN3P20807 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CAPN3P20807 RFPL4AP1-201ENST00000530883 850 ntBASIC15.57■□□□□ 0.08
CAPN3P20807 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN3P20807 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CAPN3P20807 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPN3P20807 AC105339.3-201ENST00000560043 636 ntBASIC15.57■□□□□ 0.08
CAPN3P20807 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.57■□□□□ 0.08
CAPN3P20807 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CAPN3P20807 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CAPN3P20807 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN3P20807 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN3P20807 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPN3P20807 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN3P20807 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN3P20807 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN3P20807 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CAPN3P20807 TMBIM7P-203ENST00000641617 1718 ntBASIC15.57■□□□□ 0.08
CAPN3P20807 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CAPN3P20807 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 AL109954.1-202ENST00000564051 2148 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CAPN3P20807 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 RNU1-129P-201ENST00000384064 167 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CAPN3P20807 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 FAM8A3P-201ENST00000427218 844 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.56■□□□□ 0.08
CAPN3P20807 METTL21AP1-201ENST00000438852 635 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 IGHV3-65-201ENST00000523210 341 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.56■□□□□ 0.08
CAPN3P20807 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.56■□□□□ 0.08
CAPN3P20807 SNHG9-202ENST00000564014 471 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 OR7E47P-204ENST00000575924 449 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 U1.21-201ENST00000580816 167 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN3P20807 ACTL9-202ENST00000612068 1252 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN3P20807 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN3P20807 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CAPN3P20807 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 AC099063.4-201ENST00000641099 1602 ntBASIC15.56■□□□□ 0.08
CAPN3P20807 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CAPN3P20807 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN3P20807 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN3P20807 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN3P20807 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.55■□□□□ 0.08
CAPN3P20807 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
CAPN3P20807 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CAPN3P20807 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
CAPN3P20807 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN3P20807 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN3P20807 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN3P20807 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN3P20807 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms