Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.45□□□□□ -0.1
APOA1P02647 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 AC005912.2-201ENST00000619492 2400 ntBASIC14.44□□□□□ -0.1
APOA1P02647 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 AC013726.1-201ENST00000563747 2285 ntBASIC14.44□□□□□ -0.1
APOA1P02647 AC117489.1-201ENST00000625169 3217 ntBASIC14.44□□□□□ -0.1
APOA1P02647 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 SPDYE15P-201ENST00000424157 909 ntBASIC14.44□□□□□ -0.1
APOA1P02647 GCSHP5-201ENST00000443090 522 ntBASIC14.44□□□□□ -0.1
APOA1P02647 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.44□□□□□ -0.1
APOA1P02647 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
APOA1P02647 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 AL138966.2-201ENST00000621997 464 ntBASIC14.44□□□□□ -0.1
APOA1P02647 AL031432.5-201ENST00000641059 760 ntBASIC14.44□□□□□ -0.1
APOA1P02647 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.44□□□□□ -0.1
APOA1P02647 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
APOA1P02647 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOA1P02647 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.43□□□□□ -0.1
APOA1P02647 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.43□□□□□ -0.1
APOA1P02647 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.43□□□□□ -0.1
APOA1P02647 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 PRORSD1P-201ENST00000295112 541 ntBASIC14.43□□□□□ -0.1
APOA1P02647 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
APOA1P02647 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 AL355075.4-201ENST00000554988 638 ntBASIC14.43□□□□□ -0.1
APOA1P02647 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
APOA1P02647 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.43□□□□□ -0.1
APOA1P02647 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms