Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 PCDHB18P-201ENST00000524813 2368 ntBASIC23.66■■□□□ 1.38
RAPGEF3O95398 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 MSRA-203ENST00000441698 788 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 Z97180.1-201ENST00000445173 988 ntBASIC23.66■■□□□ 1.38
RAPGEF3O95398 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 AC022217.1-201ENST00000521069 738 ntBASIC23.66■■□□□ 1.38
RAPGEF3O95398 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 AL450472.2-201ENST00000603663 1156 ntBASIC23.66■■□□□ 1.38
RAPGEF3O95398 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF3O95398 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF3O95398 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 AC079178.1-201ENST00000420915 656 ntBASIC23.65■■□□□ 1.38
RAPGEF3O95398 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RAPGEF3O95398 AC134407.2-201ENST00000625089 1978 ntBASIC23.65■■□□□ 1.38
RAPGEF3O95398 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF3O95398 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF3O95398 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RAPGEF3O95398 AL138799.1-201ENST00000448213 1675 ntBASIC23.64■■□□□ 1.38
RAPGEF3O95398 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF3O95398 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.64■■□□□ 1.38
RAPGEF3O95398 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 CRCP-204ENST00000398684 492 ntTSL 2 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 RPL13AP19-201ENST00000434320 584 ntBASIC23.64■■□□□ 1.37
RAPGEF3O95398 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC23.64■■□□□ 1.37
RAPGEF3O95398 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF3O95398 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 PARVG-202ENST00000415224 999 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 DIO1-215ENST00000610607 796 ntTSL 5 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 AC244157.2-201ENST00000616239 1006 ntBASIC23.63■■□□□ 1.37
RAPGEF3O95398 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RAPGEF3O95398 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF3O95398 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF3O95398 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF3O95398 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF3O95398 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF3O95398 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RAPGEF3O95398 AL390961.4-201ENST00000623958 2535 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms