Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.03□□□□□ -0.16
CCNKO75909 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCNKO75909 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCNKO75909 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 AC118758.2-201ENST00000614242 2813 ntBASIC14.02□□□□□ -0.16
CCNKO75909 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.02□□□□□ -0.16
CCNKO75909 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CCNKO75909 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCNKO75909 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCNKO75909 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.02□□□□□ -0.16
CCNKO75909 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.02□□□□□ -0.16
CCNKO75909 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNKO75909 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCNKO75909 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 AL390955.1-201ENST00000428694 934 ntBASIC14.02□□□□□ -0.17
CCNKO75909 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 MIR3917-201ENST00000580971 93 ntBASIC14.02□□□□□ -0.17
CCNKO75909 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.02□□□□□ -0.17
CCNKO75909 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.02□□□□□ -0.17
CCNKO75909 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CCNKO75909 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.17
CCNKO75909 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.02□□□□□ -0.17
CCNKO75909 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNKO75909 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCNKO75909 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNKO75909 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CCNKO75909 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNKO75909 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 AC008677.1-201ENST00000519230 1561 ntBASIC14.01□□□□□ -0.17
CCNKO75909 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCNKO75909 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNKO75909 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
CCNKO75909 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 RPS2P55-201ENST00000397318 883 ntBASIC14.01□□□□□ -0.17
CCNKO75909 AC009947.2-201ENST00000444014 672 ntBASIC14.01□□□□□ -0.17
CCNKO75909 CCR12P-201ENST00000446203 998 ntBASIC14.01□□□□□ -0.17
CCNKO75909 AC107956.1-201ENST00000494359 873 ntBASIC14.01□□□□□ -0.17
CCNKO75909 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNKO75909 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.01□□□□□ -0.17
CCNKO75909 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNKO75909 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 AC026471.5-201ENST00000615068 467 ntBASIC14.01□□□□□ -0.17
CCNKO75909 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNKO75909 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNKO75909 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNKO75909 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.01□□□□□ -0.17
CCNKO75909 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms