Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SLC43A1O75387 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC43A1O75387 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 AL596087.1-201ENST00000400979 1969 ntBASIC14.69□□□□□ -0.06
SLC43A1O75387 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC43A1O75387 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC43A1O75387 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 AL603832.2-201ENST00000566195 2125 ntBASIC14.68□□□□□ -0.06
SLC43A1O75387 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC43A1O75387 FAM58CP-201ENST00000435741 640 ntBASIC14.68□□□□□ -0.06
SLC43A1O75387 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC43A1O75387 DNAJB3-201ENST00000446806 729 ntBASIC14.68□□□□□ -0.06
SLC43A1O75387 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.68□□□□□ -0.06
SLC43A1O75387 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC43A1O75387 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC43A1O75387 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SLC43A1O75387 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC43A1O75387 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC43A1O75387 WASH6P-202ENST00000359512 1437 ntBASIC14.67□□□□□ -0.06
SLC43A1O75387 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC43A1O75387 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC43A1O75387 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC43A1O75387 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC43A1O75387 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC43A1O75387 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC43A1O75387 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 AL078644.1-201ENST00000609881 752 ntBASIC14.67□□□□□ -0.06
SLC43A1O75387 AC091812.2-201ENST00000619081 385 ntBASIC14.67□□□□□ -0.06
SLC43A1O75387 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC43A1O75387 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC43A1O75387 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC43A1O75387 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms