Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSSCA1O60232 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
SSSCA1O60232 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.21□□□□□ -0.29
SSSCA1O60232 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.21□□□□□ -0.29
SSSCA1O60232 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.21□□□□□ -0.29
SSSCA1O60232 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSSCA1O60232 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSSCA1O60232 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.21□□□□□ -0.3
SSSCA1O60232 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SSSCA1O60232 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SSSCA1O60232 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSSCA1O60232 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.2□□□□□ -0.3
SSSCA1O60232 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSSCA1O60232 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 AC016734.2-201ENST00000624325 1377 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 AC008677.1-201ENST00000519230 1561 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSSCA1O60232 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 AC026748.1-201ENST00000624349 3251 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.2□□□□□ -0.3
SSSCA1O60232 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.2□□□□□ -0.3
SSSCA1O60232 LINC00265-3P-201ENST00000447588 903 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SSSCA1O60232 AC074051.2-201ENST00000565115 352 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.2□□□□□ -0.3
SSSCA1O60232 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SSSCA1O60232 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.2□□□□□ -0.3
SSSCA1O60232 U82695.1-201ENST00000635752 1889 ntBASIC13.2□□□□□ -0.3
SSSCA1O60232 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSSCA1O60232 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.2□□□□□ -0.3
SSSCA1O60232 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.19□□□□□ -0.3
SSSCA1O60232 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 PI4KAP1-204ENST00000612579 1703 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SSSCA1O60232 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
SSSCA1O60232 POM121L3P-201ENST00000419331 1163 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 IGHV3-47-201ENST00000425060 335 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 DRAXINP1-201ENST00000437611 948 ntBASIC13.19□□□□□ -0.3
SSSCA1O60232 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSSCA1O60232 AC104076.2-201ENST00000448912 469 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms