Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN6O15212 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN6O15212 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN6O15212 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.21■□□□□ 0.19
PFDN6O15212 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN6O15212 AC023274.1-201ENST00000418278 595 ntBASIC16.21■□□□□ 0.19
PFDN6O15212 FAM58CP-201ENST00000435741 640 ntBASIC16.21■□□□□ 0.19
PFDN6O15212 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 MTDHP5-201ENST00000598980 586 ntBASIC16.21■□□□□ 0.19
PFDN6O15212 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PFDN6O15212 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN6O15212 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.21■□□□□ 0.19
PFDN6O15212 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.21■□□□□ 0.19
PFDN6O15212 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN6O15212 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN6O15212 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PFDN6O15212 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN6O15212 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN6O15212 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PFDN6O15212 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.21■□□□□ 0.18
PFDN6O15212 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PFDN6O15212 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PFDN6O15212 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN6O15212 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 TFAMP1-201ENST00000412727 736 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 AL355306.1-201ENST00000415580 579 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 MCCD1P2-201ENST00000423228 335 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 AC098859.1-201ENST00000502915 1238 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.2■□□□□ 0.18
PFDN6O15212 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.2■□□□□ 0.18
PFDN6O15212 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PFDN6O15212 AL603832.2-201ENST00000566195 2125 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 MIR4321-201ENST00000592276 80 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 AC099522.2-201ENST00000607001 744 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 AC008267.7-201ENST00000624570 1194 ntBASIC16.2■□□□□ 0.18
PFDN6O15212 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PFDN6O15212 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PFDN6O15212 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PFDN6O15212 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.19■□□□□ 0.18
PFDN6O15212 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN6O15212 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 AL365203.3-201ENST00000609742 2057 ntBASIC16.19■□□□□ 0.18
PFDN6O15212 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PFDN6O15212 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PFDN6O15212 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.19■□□□□ 0.18
PFDN6O15212 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN6O15212 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.19■□□□□ 0.18
PFDN6O15212 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.19■□□□□ 0.18
PFDN6O15212 AC004832.2-201ENST00000426397 482 ntBASIC16.19■□□□□ 0.18
PFDN6O15212 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms