Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 FP325330.2-201ENST00000624219 5630 ntBASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 KLF4P1-201ENST00000412782 1185 ntBASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AC148477.4-201ENST00000613430 1793 ntBASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AC015656.1-201ENST00000624209 3578 ntBASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms