Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AC134407.2-201ENST00000625089 1978 ntBASIC11.36□□□□□ -0.59
LINC01546A6NGU7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AC096582.2-201ENST00000510860 516 ntBASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RNF152P1-201ENST00000397754 604 ntBASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MIR3909-201ENST00000579518 119 ntBASIC11.35□□□□□ -0.59
LINC01546A6NGU7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 AL022326.1-202ENST00000641533 845 ntBASIC11.35□□□□□ -0.59
LINC01546A6NGU7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms