Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AC099522.2-201ENST00000607001 744 ntBASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 CDC14C-201ENST00000428251 1719 ntBASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC02447-202ENST00000501888 2146 ntBASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA11Q9Y5H2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 MIR940-201ENST00000401276 94 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AC023274.1-201ENST00000418278 595 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AL671277.1-201ENST00000429656 993 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 AC091812.2-201ENST00000619081 385 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms