Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 REXO1L1P-202ENST00000608646 1974 ntBASIC18.41■□□□□ 0.54
FBXO28Q9NVF7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 HAUS4P1-201ENST00000406739 1145 ntBASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 MIR1909-201ENST00000411312 80 ntBASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 AC104596.2-201ENST00000512793 793 ntBASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 MIR6752-201ENST00000618442 71 ntBASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.4■□□□□ 0.54
FBXO28Q9NVF7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FBXO28Q9NVF7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC018892.3-201ENST00000623986 2499 ntBASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 HNRNPUP1-201ENST00000554987 333 ntBASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 RAB43P1-201ENST00000561790 589 ntBASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC008735.3-201ENST00000596646 500 ntBASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AC017083.2-201ENST00000608069 979 ntBASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FBXO28Q9NVF7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 AC006449.6-201ENST00000612330 2296 ntBASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 AC007389.4-201ENST00000454674 793 ntBASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 PHKG1P2-201ENST00000457537 863 ntBASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.38■□□□□ 0.53
FBXO28Q9NVF7 AC106886.1-201ENST00000568660 600 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms