Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 AC127383.1-201ENST00000444697 1800 ntBASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 PMS2P7-201ENST00000506558 1336 ntBASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 CRYGEP-201ENST00000412192 528 ntBASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 RNA5SP419-201ENST00000515908 135 ntBASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC52A3Q9NQ40 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 TSPY26P-202ENST00000565928 3884 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 IGHV3-22-201ENST00000520721 359 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AC073389.1-201ENST00000595595 795 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AC116407.3-201ENST00000623905 1129 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AL009178.2-201ENST00000597278 2719 ntBASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC52A3Q9NQ40 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 LINC00528-201ENST00000600723 2160 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms