Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.18□□□□□ -0.14
ELL3Q9HB65 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ELL3Q9HB65 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ELL3Q9HB65 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ELL3Q9HB65 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ELL3Q9HB65 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 AC108073.2-201ENST00000464002 357 ntBASIC14.17□□□□□ -0.14
ELL3Q9HB65 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 AC120114.3-201ENST00000611923 658 ntBASIC14.17□□□□□ -0.14
ELL3Q9HB65 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.17□□□□□ -0.14
ELL3Q9HB65 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ELL3Q9HB65 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.17□□□□□ -0.14
ELL3Q9HB65 AC129492.6-201ENST00000611383 1305 ntBASIC14.16□□□□□ -0.14
ELL3Q9HB65 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.16□□□□□ -0.14
ELL3Q9HB65 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 HCG4-201ENST00000418983 998 ntBASIC14.16□□□□□ -0.14
ELL3Q9HB65 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 RNA5SP415-201ENST00000517246 115 ntBASIC14.16□□□□□ -0.14
ELL3Q9HB65 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.16□□□□□ -0.14
ELL3Q9HB65 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ELL3Q9HB65 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms