Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AL355306.1-201ENST00000415580 579 ntBASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AC023141.5-201ENST00000458585 616 ntBASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 MIR4515-201ENST00000584082 81 ntBASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAF4Q9BUZ4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AL671277.1-201ENST00000429656 993 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 TIMM8BP1-201ENST00000452384 211 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 HLA-J-203ENST00000494367 1087 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 FAM86C2P-203ENST00000528684 1004 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 LINC02084-201ENST00000606069 1096 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AC099522.2-201ENST00000607001 744 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AC026120.1-201ENST00000611536 926 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 PPT1-215ENST00000641471 2368 ntBASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAF4Q9BUZ4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms