Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV9Q99603 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV9Q99603 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV9Q99603 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 IGLL3P-201ENST00000412472 434 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV9Q99603 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.6□□□□□ -0.39
TRGV9Q99603 RHOQP3-201ENST00000437982 621 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 HCG4B-203ENST00000450128 991 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.6□□□□□ -0.39
TRGV9Q99603 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 UNC93B6-202ENST00000528242 690 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 AL773604.1-201ENST00000617417 272 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 AC148477.8-201ENST00000624298 468 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 AP003680.1-201ENST00000598970 3660 ntBASIC12.6□□□□□ -0.39
TRGV9Q99603 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV9Q99603 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV9Q99603 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV9Q99603 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV9Q99603 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRGV9Q99603 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 AC099063.4-201ENST00000641099 1602 ntBASIC12.59□□□□□ -0.39
TRGV9Q99603 AC092850.2-201ENST00000623821 2697 ntBASIC12.59□□□□□ -0.39
TRGV9Q99603 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
TRGV9Q99603 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV9Q99603 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV9Q99603 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV9Q99603 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV9Q99603 AC140658.5-201ENST00000438532 169 ntBASIC12.59□□□□□ -0.39
TRGV9Q99603 AC098831.1-202ENST00000438821 336 ntBASIC12.59□□□□□ -0.39
TRGV9Q99603 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV9Q99603 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV9Q99603 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV9Q99603 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms