Protein–RNA interactions for Protein: Q96DC9

OTUB2, Ubiquitin thioesterase OTUB2, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB2Q96DC9 CLK3P2-201ENST00000427566 1453 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 RN7SL837P-201ENST00000463010 287 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AC092552.1-201ENST00000547243 906 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 MIR8072-201ENST00000614241 80 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 AL158212.4-201ENST00000624062 1286 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 REXO1L1P-202ENST00000608646 1974 ntBASIC16.36■□□□□ 0.21
OTUB2Q96DC9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
OTUB2Q96DC9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC074338.1-201ENST00000416825 156 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AL442647.2-201ENST00000429864 857 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 SLED1-202ENST00000512051 380 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC132938.2-201ENST00000579188 680 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 WFDC1-204ENST00000613603 549 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AL591163.1-201ENST00000641757 987 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 AC080080.1-201ENST00000625121 2420 ntBASIC16.35■□□□□ 0.21
OTUB2Q96DC9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
OTUB2Q96DC9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 AC092171.3-201ENST00000610122 2651 ntBASIC16.34■□□□□ 0.21
OTUB2Q96DC9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OTUB2Q96DC9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms