Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.77■□□□□ 0.11
HIPK4Q8NE63 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 AP005117.1-201ENST00000584346 1413 ntBASIC15.76■□□□□ 0.11
HIPK4Q8NE63 AL109954.1-202ENST00000564051 2148 ntBASIC15.76■□□□□ 0.11
HIPK4Q8NE63 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HIPK4Q8NE63 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PCGF3-213ENST00000620529 1899 ntBASIC15.75■□□□□ 0.11
HIPK4Q8NE63 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 NCF1C-201ENST00000438382 1427 ntBASIC15.75■□□□□ 0.11
HIPK4Q8NE63 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PTENP1-202ENST00000532280 3996 ntBASIC15.75■□□□□ 0.11
HIPK4Q8NE63 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIPK4Q8NE63 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.74■□□□□ 0.11
HIPK4Q8NE63 AC104581.4-201ENST00000623126 3052 ntBASIC15.74■□□□□ 0.11
HIPK4Q8NE63 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms