Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 AC061975.2-201ENST00000581722 295 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CPEB3Q8NE35 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CPEB3Q8NE35 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AL603832.2-201ENST00000566195 2125 ntBASIC14.14□□□□□ -0.15
CPEB3Q8NE35 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 FAM220BP-201ENST00000377689 816 ntBASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 RNA5SP410-201ENST00000516285 106 ntBASIC14.14□□□□□ -0.15
CPEB3Q8NE35 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
CPEB3Q8NE35 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 AC010491.1-201ENST00000563101 2797 ntBASIC14.13□□□□□ -0.15
CPEB3Q8NE35 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPEB3Q8NE35 HLA-H-201ENST00000383620 1096 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms