Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 GGT3P-204ENST00000453783 1664 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 OR8S1-201ENST00000310194 1080 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 DGCR5-201ENST00000399539 862 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 AL109936.8-201ENST00000641772 604 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 RNF216P1-203ENST00000404404 2427 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.4■□□□□ 0.22
CHPFQ8IZ52 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.4■□□□□ 0.22
CHPFQ8IZ52 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHPFQ8IZ52 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHPFQ8IZ52 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHPFQ8IZ52 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
CHPFQ8IZ52 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AP006294.1-201ENST00000415407 339 ntBASIC16.39■□□□□ 0.21
CHPFQ8IZ52 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AC008494.3-201ENST00000606615 944 ntBASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AC004790.1-201ENST00000612686 536 ntBASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AC004461.2-201ENST00000629517 803 ntBASIC16.39■□□□□ 0.21
CHPFQ8IZ52 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHPFQ8IZ52 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms