Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 RNF216P1-203ENST00000404404 2427 ntBASIC22.37■■□□□ 1.17
UBR1Q8IWV7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 MIR769-201ENST00000390225 118 ntBASIC22.37■■□□□ 1.17
UBR1Q8IWV7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 BX539320.1-201ENST00000623759 877 ntBASIC22.37■■□□□ 1.17
UBR1Q8IWV7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC22.37■■□□□ 1.17
UBR1Q8IWV7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 UBALD1-205ENST00000590891 2641 ntBASIC22.36■■□□□ 1.17
UBR1Q8IWV7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 AF254983.2-201ENST00000612331 135 ntBASIC22.36■■□□□ 1.17
UBR1Q8IWV7 AP003419.4-201ENST00000616071 517 ntBASIC22.36■■□□□ 1.17
UBR1Q8IWV7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC22.36■■□□□ 1.17
UBR1Q8IWV7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ACTG1P2-201ENST00000415776 1125 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ACTG1P11-201ENST00000425411 1125 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 RN7SL11P-201ENST00000471305 293 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 NUP210P1-202ENST00000504322 710 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 AC134698.3-201ENST00000523880 214 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 RN7SL713P-201ENST00000582127 302 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 PPY2P-201ENST00000582808 702 ntBASIC22.35■■□□□ 1.17
UBR1Q8IWV7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
UBR1Q8IWV7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 EEF1DP6-201ENST00000449232 372 ntBASIC22.34■■□□□ 1.17
UBR1Q8IWV7 MBP-227ENST00000526111 581 ntTSL 4 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AL138799.1-201ENST00000448213 1675 ntBASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 NDUFAB1P1-201ENST00000404262 460 ntBASIC22.34■■□□□ 1.17
UBR1Q8IWV7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AC106820.3-201ENST00000561653 397 ntBASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 AC091544.8-201ENST00000619490 361 ntBASIC22.34■■□□□ 1.17
UBR1Q8IWV7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.34■■□□□ 1.17
UBR1Q8IWV7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms