Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 RN7SL618P-201ENST00000477850 296 ntBASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 AC004890.2-204ENST00000481968 304 ntBASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM4Q86VH4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 MIR6069-201ENST00000620069 79 ntBASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 AC022144.1-201ENST00000602255 1580 ntBASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM4Q86VH4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 AC018695.7-201ENST00000624587 2492 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 KRT8P37-201ENST00000451609 1420 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 PCDH8P1-201ENST00000428983 2773 ntBASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRTM4Q86VH4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms