Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.21■□□□□ 0.83
COPS6Q7L5N1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
COPS6Q7L5N1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC092552.1-201ENST00000547243 906 ntBASIC20.2■□□□□ 0.82
COPS6Q7L5N1 HNRNPUP1-201ENST00000554987 333 ntBASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AL008721.1-201ENST00000609964 604 ntBASIC20.2■□□□□ 0.82
COPS6Q7L5N1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AC018892.3-201ENST00000623986 2499 ntBASIC20.2■□□□□ 0.82
COPS6Q7L5N1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS6Q7L5N1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ARSEP1-201ENST00000420443 635 ntBASIC20.19■□□□□ 0.82
COPS6Q7L5N1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 AL450472.2-201ENST00000603663 1156 ntBASIC20.19■□□□□ 0.82
COPS6Q7L5N1 AC097359.3-201ENST00000603982 1210 ntBASIC20.19■□□□□ 0.82
COPS6Q7L5N1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COPS6Q7L5N1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 AC136604.1-201ENST00000418535 575 ntBASIC20.18■□□□□ 0.82
COPS6Q7L5N1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.18■□□□□ 0.82
COPS6Q7L5N1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS6Q7L5N1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms