Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 MIR661-201ENST00000384842 89 ntBASIC16.96■□□□□ 0.31
RNF43Q68DV7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 RBPMS2P1-201ENST00000437762 623 ntBASIC16.96■□□□□ 0.31
RNF43Q68DV7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 ALG1L8P-201ENST00000533887 760 ntBASIC16.96■□□□□ 0.31
RNF43Q68DV7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 LINC02560-201ENST00000596379 459 ntBASIC16.96■□□□□ 0.31
RNF43Q68DV7 AC008761.3-201ENST00000624803 892 ntBASIC16.96■□□□□ 0.31
RNF43Q68DV7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF43Q68DV7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF43Q68DV7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF43Q68DV7 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF43Q68DV7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
RNF43Q68DV7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF43Q68DV7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF43Q68DV7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF43Q68DV7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF43Q68DV7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.96■□□□□ 0.3
RNF43Q68DV7 UXT-AS1-201ENST00000590504 1525 ntBASIC16.96■□□□□ 0.3
RNF43Q68DV7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNF43Q68DV7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF43Q68DV7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC073439.1-201ENST00000624121 1774 ntBASIC16.95■□□□□ 0.3
RNF43Q68DV7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC107890.1-201ENST00000422478 521 ntBASIC16.95■□□□□ 0.3
RNF43Q68DV7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 PRYP6-201ENST00000514804 343 ntBASIC16.95■□□□□ 0.3
RNF43Q68DV7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 GGT4P-201ENST00000623672 1708 ntBASIC16.95■□□□□ 0.3
RNF43Q68DV7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.95■□□□□ 0.3
RNF43Q68DV7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF43Q68DV7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF43Q68DV7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF43Q68DV7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms