Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 AC099063.4-201ENST00000641099 1602 ntBASIC14.99□□□□□ -0.01
HOXC5Q00444 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC5Q00444 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC5Q00444 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HOXC5Q00444 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
HOXC5Q00444 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 MIR648-201ENST00000385046 94 ntBASIC14.98□□□□□ -0.01
HOXC5Q00444 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.98□□□□□ -0.01
HOXC5Q00444 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC5Q00444 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC5Q00444 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.98□□□□□ -0.01
HOXC5Q00444 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 AC092865.6-201ENST00000642101 219 ntBASIC14.98□□□□□ -0.01
HOXC5Q00444 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HOXC5Q00444 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
HOXC5Q00444 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC5Q00444 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC5Q00444 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 AC073439.1-201ENST00000624121 1774 ntBASIC14.98□□□□□ -0.01
HOXC5Q00444 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC5Q00444 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HOXC5Q00444 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
HOXC5Q00444 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.97□□□□□ -0.01
HOXC5Q00444 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HOXC5Q00444 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC5Q00444 AC120114.3-201ENST00000611923 658 ntBASIC14.97□□□□□ -0.01
HOXC5Q00444 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC5Q00444 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC5Q00444 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HOXC5Q00444 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC5Q00444 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC5Q00444 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HOXC5Q00444 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC5Q00444 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC5Q00444 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC5Q00444 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC5Q00444 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC5Q00444 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC5Q00444 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC5Q00444 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms