Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM4P67936 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM4P67936 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM4P67936 AC006504.4-201ENST00000592118 1568 ntBASIC18.16■□□□□ 0.5
TPM4P67936 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM4P67936 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM4P67936 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM4P67936 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 AC021097.1-201ENST00000607902 574 ntBASIC18.15■□□□□ 0.5
TPM4P67936 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 AL355877.3-201ENST00000622820 899 ntBASIC18.15■□□□□ 0.5
TPM4P67936 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 AC008677.1-201ENST00000519230 1561 ntBASIC18.15■□□□□ 0.5
TPM4P67936 TNRC18P2-201ENST00000417666 2714 ntBASIC18.15■□□□□ 0.5
TPM4P67936 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM4P67936 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM4P67936 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM4P67936 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TPM4P67936 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TPM4P67936 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM4P67936 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM4P67936 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM4P67936 AC138969.2-201ENST00000532739 9932 ntBASIC18.14■□□□□ 0.5
TPM4P67936 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM4P67936 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 AC087481.3-201ENST00000602886 1894 ntBASIC18.14■□□□□ 0.49
TPM4P67936 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 AC136621.1-201ENST00000624017 2304 ntBASIC18.14■□□□□ 0.49
TPM4P67936 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 FAM45BP-202ENST00000592932 1624 ntBASIC18.14■□□□□ 0.49
TPM4P67936 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
TPM4P67936 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 ATP5G2P1-201ENST00000433580 426 ntBASIC18.14■□□□□ 0.49
TPM4P67936 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.14■□□□□ 0.49
TPM4P67936 AL732292.2-201ENST00000609649 430 ntBASIC18.14■□□□□ 0.49
TPM4P67936 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM4P67936 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM4P67936 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.14■□□□□ 0.49
TPM4P67936 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TPM4P67936 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM4P67936 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM4P67936 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM4P67936 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms