Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D3P61077 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D3P61077 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D3P61077 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.54□□□□□ -0.56
UBE2D3P61077 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
UBE2D3P61077 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 HMGA1P7-201ENST00000406908 502 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 PMS2P4-201ENST00000412466 1052 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.54□□□□□ -0.56
UBE2D3P61077 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.54□□□□□ -0.56
UBE2D3P61077 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 AC108751.1-201ENST00000490852 363 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.54□□□□□ -0.56
UBE2D3P61077 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.54□□□□□ -0.56
UBE2D3P61077 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 AL031432.2-201ENST00000566714 459 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 AL928711.1-201ENST00000570165 459 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.54□□□□□ -0.56
UBE2D3P61077 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
UBE2D3P61077 AC148477.8-201ENST00000624298 468 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 U82695.1-201ENST00000635752 1889 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 CDC14C-201ENST00000428251 1719 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.54□□□□□ -0.56
UBE2D3P61077 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.54□□□□□ -0.56
UBE2D3P61077 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBE2D3P61077 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UBE2D3P61077 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.53□□□□□ -0.56
UBE2D3P61077 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D3P61077 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.53□□□□□ -0.56
UBE2D3P61077 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.53□□□□□ -0.56
UBE2D3P61077 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 LINC02447-202ENST00000501888 2146 ntBASIC11.53□□□□□ -0.56
UBE2D3P61077 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
UBE2D3P61077 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
UBE2D3P61077 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.53□□□□□ -0.56
UBE2D3P61077 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.53□□□□□ -0.56
UBE2D3P61077 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D3P61077 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.53□□□□□ -0.56
UBE2D3P61077 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 AL513480.1-201ENST00000451731 511 ntBASIC11.53□□□□□ -0.56
UBE2D3P61077 AC092910.1-201ENST00000482027 1129 ntBASIC11.53□□□□□ -0.56
UBE2D3P61077 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.53□□□□□ -0.56
UBE2D3P61077 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.53□□□□□ -0.56
UBE2D3P61077 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D3P61077 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.53□□□□□ -0.56
UBE2D3P61077 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D3P61077 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms